CeNGEN Integrated mRNA data and bulk noncoding RNA lookup table
Publication Date
4-8-2022
Abstract
This CeNGEN web tool provides a user interface to datasets described in Barrett et al(1): http://bulk.cengen.org:3838/Bulk_Integrated_viz/. It can also be run as an Rshiny app locally using the attached files.
Raw data are being processed at GEO, and this resource will be updated with the accession number when available.
(1)Integrating bulk and single cell RNA-seq refines transcriptomic profiles of specific C. elegans neurons. Alec Barrett, Erdem Varol, Alexis Weinreb, Seth R. Taylor, Rebecca McWhirter, CyrilCros, Manasa Basavaraju, Abigail Poff, John A. Tipps, Maryam Majeed, Berta Vidal, Chen Wang, Eviatar Yemini, Emily A. Bayer, HaoSheng Sun, Oliver Hobert, David M.Miller III, Marc Hammarlund. bioRxiv 2022.04.05.487209; doi: https://doi.org/10.1101/2022.04.05.487209
Repository
Zenodo
Distribution License
This work is licensed under a Creative Commons Attribution 4.0 International License.
Access Instructions and Link
This data is available under the CC-BY 4.0 License
Recommended Citation
Barrett, Alec; Varol, Erdem; Weinreb, Alexis; Taylor, Seth R.; McWhirter, Rebecca; Cros, Cyril; Basavaraju, Manasa; Poff, Abigail; Tipps, John A.; Majeed, Maryam; Vidal, Berta; Wang, Chen; Yemini, Eviatar; Bayer, Emily A.; Sun, HaoSheng; Hobert, Oliver; Miller, David M.; and Hammarlund, Marc, "CeNGEN Integrated mRNA data and bulk noncoding RNA lookup table" (2022). UAB Research Data Catalog. 73.
https://digitalcommons.library.uab.edu/datasets/73
