UAB's Research Data Catalog is an online collection of records describing datasets generated by UAB researchers. The catalog does not directly include or store datasets, but functions as a directory to assist with discovery of datasets deposited in external data repositories such as Zenodo, Dryad, ICPSR, and Figshare.
If you are interested in submitting a dataset link to the Research Data Catalog, please fill out this intake form https://forms.office.com/r/GHzzvq3czL. If you have questions or suggestions, contact Marla Hertz at mihertz@uab.edu or Amy Reese at reesea@uab.edu.
Submissions from 2025
Accelerating Drug Repurposing for Rett Syndrome Project, Enya Ratkic, Andrew Trotter, and Kevin Song
A Clonal Legacy? Reproductive Mode Variation In Hard and Soft Bottom Gracilaria Vermiculophylla Populations, Alexis Oetterer, Solenn Stoeckel, Will Ryan, Stacy Krueger-Hadfield, and Stacy Krueger-Hadfield
Additional file 17 of Mirabegron treatment reduces myofibroblasts and CXCR2 expression in adipose tissue in obesity, Brian S. Finlin, Hasiyet Memetimin, Philip M. Westgate, Jin Chen, Esther E. Dupont-Versteegden, and Philip A. Kern
Additional file 18 of Mirabegron treatment reduces myofibroblasts and CXCR2 expression in adipose tissue in obesity, Brian S. Finlin, Hasiyet Memetimin, Philip M. Westgate, Jin Chen, Esther E. Dupont-Versteegden, and Philip A. Kern
Additional file 19 of Mirabegron treatment reduces myofibroblasts and CXCR2 expression in adipose tissue in obesity, Brian S. Finlin, Hasiyet Memetimin, Philip M. Westgate, Jin Chen, Esther E. Dupont-Versteegden, and Philip A. Kern
Additional file 1 of Analysis of ductal carcinoma in situ by self-reported race reveals molecular differences related to outcome, Siri H. Strand, Kathleen E. Houlahan, Vernal Branch, Lorraine M. King, Thomas Lynch, Belén Rivero-Guitiérrez, Bryan Harmon, Fergus Couch, Kristalyn Gallagher, Mark Kilgore, Shi Wei, Angela DeMichele, Tari King, Priscilla McAuliffe, Christina Curtis, Kouros Owzar, Jeffrey R. Marks, Graham A. Colditz, E. Shelley Hwang, and Robert B. West
Additional file 1 of Identifying and exploiting combinatorial synthetic lethality by characterizing adaptive kinome rewiring of EGFRvIII-driven glioblastoma, Benjamin Lin, Abigail K. Shelton, Erin Smithberger, Julia Ziebro, Kasey R. Skinner, Ryan E. Bash, Richard Kirkman, Allie Stamper, Madison Butler, Alex Flores, Steven P. Angus, Michael P. East, Timothy F. Cloughesy, David A. Nathanson, Michael E. Berens, Jann N. Sarkaria, Zev A. Binder, Donald M. O’Rourke, Timothy C. Howton, Brittany N. Lasseigne, Christopher D. Willey, Gary L. Johnson, Anita B. Hjelmeland, Frank B. Furnari, and C Ryan Miller
Additional file 1 of Structural and evolutionary features of red algal UV sex chromosomes, Agnieszka P. Lipinska, Guillaume Cossard, Paul Epperlein, Tobias Woertwein, Cecile Molinier, Olivier Godfroy, Sabrina Carli, Ligia Ayres-Ostrock, Emma Lavaut, Fabiana Marchi, Stephane Mauger, Christophe Destombe, Mariana C. Oliveira, Estela M. Plastino, Stacy A. Krueger-Hadfield, Marie-Laure Guillemin, Myriam Valero, and Susana M. Coelho
Additional file 20 of Mirabegron treatment reduces myofibroblasts and CXCR2 expression in adipose tissue in obesity, Brian S. Finlin, Hasiyet Memetimin, Philip M. Westgate, Jin Chen, Esther E. Dupont-Versteegden, and Philip A. Kern
Children's Decisions about how to Negotiate a Virtual Reality Stepping Stones Task, Ellen Beate Sandseter, Ole Johan Sando, Håvard Lorås, Rasmus Kleppe, Lise Storli, and David Schwebel
Chromatin Structural Gene Expression Stratifies Cardiac Cell Populations in Health and Disease, Manuel Rosa-Garrido, Xiaoxiao Geng, Rujula Pradeep, Riley Porter, Lucía García-Gutiérrez, Min Xie, Adam Wende, Jianyi Zhang, Isidoro Cobo, and Thanh Nguyen
Cortical synaptic vulnerabilities revealed in an alpha-synuclein aggregation model of Parkinson's disease: Dataset for excitatory and inhibitory synaptic loci analysis, Saroj Kumar Sah and Thomas Biederer
Data related to "Human TDP-43 expression worsens FTD-related phenotypes in progranulin-insufficient mice", Anna K. Cook, Benjamin Lin, Kelsey M. Greathouse, Azariah K. Kaplelach, Skylar E. Davis, Anna C. Stoll, Justin A. Hall, Ahmad R. Hakim, Jakub F. Hel, Giacynta A. Vollmer, Alexandria C. Howard, Noelle H. Cooper, Phaedra N. Manuel, Juliana M. Eberhardt, C. Ryan Miller, Ashley S. Harms, Jeremy H. Herskowitz, and Andrew E. Arrant
Data related to "Tau, amyloid-beta and alpha-synuclein co-pathologies synergistically enhance neuroinflammation and neuropathology", Jhodi Webster and Ashley Harms
Dataset Medical Noise Image (FFTMed), Viet Tien Pham
Differentiated community-based point-of-care early infant diagnosis to improve HIV diagnosis and ART initiation among infants and young children in Zambia: A quasi-experimental cohort study, Jake Pry, Albert Manasyan, Taniya Tembo, Helen Dale, Megumi Itoh, Dhelia Williamson, Herbert Kapesa, Josip Derado, Rachel Suzanne Beard, Salome Gass, Annie Mwila, and Michael Herce
Disrupted development of sensory systems and the cerebellum in a zebrafish ebf3a mutant, Summer Thyme
Disrupted Diencephalon Development and Neuropeptidergic Pathways in Zebrafish with Autism Risk Mutations, Summer Thyme
Dopamine and acetylcholine correlations in the nucleus accumbens depend on behavioral task states, Kauê Costa, Zhang Zhang, Douglas Deutsch, YIZHOU ZHUO, Guochuan Li, Yulong Li, and Geoffrey Schoenbaum
ICTV 2024 Virus Metadata Resource (VMR), Elliot Lefkowitz, Donald B. Smith, and Robert Hendrickson
ICTV Master Species List 2024 MSL40.v1, Elliot Lefkowitz and Robert Hendrickson
ICTV Master Species List 2024 MSL40.v2, Elliot Lefkowitz, Robert Hendrickson, and International Committee Viruses
Identification of amino acid substitution by mass spectrometry-based proteomics, Chen Huang
Identifying differentiation markers between dermal fibroblasts and adipose-derived mesenchymal stromal cells (AD-MSCs) in human visceral and subcutaneous tissues using single-cell transcriptomics (additional file 2), Magdalena Koczkowska, Anna Kostecka, Małgorzata Zawrzykraj, Kamil Myszczyński, Aneta Skoniecka, Milena Deptuła, Agata Tymińska, Katarzyna Czerwiec, Marcin Jąkalski, Jacek Zieliński, David K. Crossman, Michael R. Crowley, Mirosława Cichorek, Piotr M. Skowron, Michał Pikuła, and Arkadiusz Piotrowski
Identifying differentiation markers between dermal fibroblasts and adipose-derived mesenchymal stromal cells (AD-MSCs) in human visceral and subcutaneous tissues using single-cell transcriptomics (additional file 3), Magdalena Koczkowska, Anna Kostecka, Małgorzata Zawrzykraj, Kamil Myszczyński, Aneta Skoniecka, Milena Deptuła, Agata Tymińska, Katarzyna Czerwiec, Marcin Jąkalski, Jacek Zieliński, David K. Crossman, Michael R. Crowley, Mirosława Cichorek, Piotr M. Skowron, Michał Pikuła, and Arkadiusz Piotrowski
Identifying differentiation markers between dermal fibroblasts and adipose-derived mesenchymal stromal cells (AD-MSCs) in human visceral and subcutaneous tissues using single-cell transcriptomics (additional file 4), Magdalena Koczkowska, Anna Kostecka, Małgorzata Zawrzykraj, Kamil Myszczyński, Aneta Skoniecka, Milena Deptuła, Agata Tymińska, Katarzyna Czerwiec, Marcin Jąkalski, Jacek Zieliński, David K. Crossman, Michael R. Crowley, Mirosława Cichorek, Piotr M. Skowron, Michał Pikuła, and Arkadiusz Piotrowski
Identifying differentiation markers between dermal fibroblasts and adipose-derived mesenchymal stromal cells (AD-MSCs) in human visceral and subcutaneous tissues using single-cell transcriptomics (additional file 5), Magdalena Koczkowska, Anna Kostecka, Małgorzata Zawrzykraj, Kamil Myszczyński, Aneta Skoniecka, Milena Deptuła, Agata Tymińska, Katarzyna Czerwiec, Marcin Jąkalski, Jacek Zieliński, David K. Crossman, Michael R. Crowley, Mirosława Cichorek, Piotr M. Skowron, Michał Pikuła, and Arkadiusz Piotrowski
Identifying differentiation markers between dermal fibroblasts and adipose-derived mesenchymal stromal cells (AD-MSCs) in human visceral and subcutaneous tissues using single-cell transcriptomics (additional file 6), Magdalena Koczkowska, Anna Kostecka, Małgorzata Zawrzykraj, Kamil Myszczyński, Aneta Skoniecka, Milena Deptuła, Agata Tymińska, Katarzyna Czerwiec, Marcin Jąkalski, Jacek Zieliński, David K. Crossman, Michael R. Crowley, Mirosława Cichorek, Piotr M. Skowron, Michał Pikuła, and Arkadiusz Piotrowski
Identifying differentiation markers between dermal fibroblasts and adipose-derived mesenchymal stromal cells (AD-MSCs) in human visceral and subcutaneous tissues using single-cell transcriptomics (additional file 7), Magdalena Koczkowska, Anna Kostecka, Małgorzata Zawrzykraj, Kamil Myszczyński, Aneta Skoniecka, Milena Deptuła, Agata Tymińska, Katarzyna Czerwiec, Marcin Jąkalski, Jacek Zieliński, David K. Crossman, Michael R. Crowley, Mirosława Cichorek, Piotr M. Skowron, Michał Pikuła, and Arkadiusz Piotrowski
Isoprene deters insect herbivory by priming plant hormone responses, Abira Sahu, Mohammad Golam Mostofa, Yuan Xu, Bianca M. Serda, James O’ Keefe, and Thomas D. Sharkey
Monoicy, dioicy, and genetic structure in three species of Sheathia (Batrachospermales, Rhodophyta), Sarah Shainker-Connelly, Solenn Stoeckel, Morgan L. Vis, Stacy Krueger-Hadfield, and Stacy Krueger-Hadfield
PharmaKG Explorer: Knowledge Graph Embedding-Driven Conversational Querying and Real Time Link Prediction in Drug-Gene-Disease Networks, Shehan Irteza Pranto
Seruat v5 R object for Tuscher et al 2025 bioRxiv preprint snRNA-seq dataset, Jeremy Day
Single Cell RNASeq of motor cortex in a mouse model of alpha-synuclein pathology, Viktor Feketa, Elena Gracheva, Michael Henderson, Elizabeth Breton, Lindsay Meyerdirk, Laura Volpicelli-Daley, Marissa Menard, and Thomas Biederer
Striatal dopamine signals errors in prediction across different informational domains, Kauê Costa, Akihiro Shimbo, Thomas Stalnaker, Nishika Raheja, Jash Mirani, Courtney Sercander, and Geoffrey Schoenbaum
Supplemental MotePOR Outplant 2021-2022, Shelby Gantt and Dustin Kemp
The protein databases used for identifying amino acid substitution by mass spectrometry-based proteomics, Chen Huang
The sustainability of health interventions implemented in Africa: an updated systematic review on evidence and future research perspectives (additional file 2), Ucheoma Nwaozuru, Patrick Murphy, Ashley Richard, Chisom Obiezu-Umeh, Thembekile Shato, Ifeoma Obionu, Titilola Gbajabiamila, David Oladele, Stacey Mason, Bryce P. Takenaka, Lateef Akeem Blessing, Alexis Engelhart, Susan Nkengasong, Innocent David Chinaemerem, Onyekachukwu Anikamadu, Ebenezer Adeoti, Pranali Patel, Temitope Ojo, Olufunto Olusanya, Donna Shelley, Collins Airhihenbuwa, Gbenga Ogedegbe, Oliver Ezechi, and Juliet Iwelunmor
Submissions from 2024
A case–control study of the association between the gut microbiota and colorectal cancer: exploring the roles of diet, stress, and race (additional file 1), Tiffany L. Carson, Doratha A. Byrd, Kristen S. Smith, Daniel Carter, Maria Gomez, Michael Abaskaron, Rebecca B. Little, Sh’Nese Townsend Holmes, William J. van Der Pol, Elliot J. Lefkowitz, Casey D. Morrow, and Andrew D. Fruge
A case–control study of the association between the gut microbiota and colorectal cancer: exploring the roles of diet, stress, and race (additional file 2), Tiffany L. Carson, Doratha A. Byrd, Kristen S. Smith, Daniel Carter, Maria Gomez, Michael Abaskaron, Rebecca B. Little, Sh’Nese Townsend Holmes, William J. van Der Pol, Elliot J. Lefkowitz, Casey D. Morrow, and Andrew D. Fruge
Alpha-synuclein overexpression can drive microbiome dysbiosis in mice, Timothy Sampson, Zachary Wallen, Woong-Jai Won, David Standaert, Haydeh Payami, and Ashley Harms
Altered glia-neuron communication in Alzheimer’s Disease affects WNT, p53, and NFkB Signaling determined by snRNA-seq (additional file 1), Tabea M. Soelter, Timothy C. Howton, Amanda D. Clark, Vishal H. Oza, and Brittany N. Lasseigne
Altered glia-neuron communication in Alzheimer’s Disease affects WNT, p53, and NFkB Signaling determined by snRNA-seq (additional file 2), Tabea M. Soelter, Timothy C. Howton, Amanda D. Clark, Vishal H. Oza, and Brittany N. Lasseigne
Altered glia-neuron communication in Alzheimer’s Disease affects WNT, p53, and NFkB Signaling determined by snRNA-seq (additional file 3), Tabea M. Soelter, Timothy C. Howton, Amanda D. Clark, Vishal H. Oza, and Brittany N. Lasseigne
Analysis of ductal carcinoma in situ by self-reported race reveals molecular differences related to outcome (additional file 1), Siri H. Strand, Kathleen E. Houlahan, Vernal Branch, Thomas Lynch, Belén Rivero-Guitiérrez, Bryan Harmon, Fergus Couch, Kristalyn Gallagher, Mark Kilgore, Shi Wei, Angela DeMichele, Tari King, Priscilla McAuliffe, Christina Curtis, Kouros Owzar, Jeffrey R. Marks, Graham A. Colditz, E. Shelley Hwang, and Robert B. West
Antigen-specific memory NK cell responses against HIV and influenza utilize the NKG2/HLA-E axis, Stephanie Jost, Olivier Lucar, Esther Lee, Taylor Yoder, Kyle Kroll, Sho Sugawara, Scott Smith, Rhianna Jones, George Tweet, Alexandra Werner, Phillip Tomezsko, Haley Dugan, Joshua Ghofrani, Philippe Rascle, Marcus Altfeld, Michaela Müller-Trutwin, Paul Goepfert, and R Keith Reeves
Biomechanical stimulation promotes blood vessel growth despite VEGFR-2 inhibition (additional file 2), Bronte Miller Johnson, Allison McKenzie Johnson, Michael Heim, Molly Buckley, Bryan Mortimer, Joel L. Berry, and Mary Kathryn Sewell-Loftin
Brida 2024 data files, Kasey Brida
Center for AIDS Research (CFAR) public health datasets, Aadia Rana
Characterization of essential eggshell proteins from Aedes aegypti mosquitoes (additional file 12), Jun Isoe, Carter J. Simington, Max E. Oscherwitz, Alyssa J. Peterson, Alberto A. Rascón, Brooke B. Massani, Roger L. Miesfeld, and Michael A. Riehle
