UAB's Research Data Catalog is an online collection of records describing datasets generated by UAB researchers. The catalog does not directly include or store datasets, but functions as a directory to assist with discovery of datasets deposited in external data repositories such as Zenodo, Dryad, ICPSR, and Figshare.
If you are interested in submitting a dataset link to the Research Data Catalog, please fill out this intake form https://forms.office.com/r/GHzzvq3czL. If you have questions or suggestions, contact Marla Hertz at mihertz@uab.edu or Amy Reese at reesea@uab.edu.
Submissions from 2024
Children’s injury database: development of an injury surveillance system in a pediatric emergency department (additional file 1), Jennifer E. McCain, Ashley E. Bridgmon, William D. King, and Kathy Monroe
Clinical, genetic, and cognitive correlates of seizure occurrences in Phelan-McDermid syndrome (additional file 1), Tess Levy, Jacob Gluckman, Paige M. Siper, Danielle Halpern, Jessica Zweifach, Rajna Filip-Dhima, J. Lloyd Holder, M. Pilar Trelles, Kristina Johnson, Jonathan A. Bernstein, Elizabeth Berry-Kravis, Craig M. Powell, Latha Valluripalli Soorya, Audrey Thurm, Joseph D. Buxbaum, Mustafa Sahin, Alexander Kolevzon, and Siddharth Srivastava
Clonality Contributes To The Spread Of Avrainvillea Lacerata (Bryopsidales, Chlorophyta) In Hawaiʻi, Brinkley Thornton, Heather Spalding, Solenn Stoeckel, Melissa Harris, Rachael Wade, and Stacy Krueger-Hadfield
Collaborative Resource for Intensive care Translational science, Informatics, Comprehensive Analytics, and Learning (CRITICAL), Yuan Luo, Luke Rasmussen, Andrew Williams, Jared Houghtaling, Andrew Michelson, Philip Payne, James Cimino, John Osborne, Prasanth Nannapaneni, Yikuan Li, Saki Amagai, Meghan Hutch, Jenny Ding, Adrienne Kline, Catherine A. Gao, Jason Womack, Rui Zhu, Matthew Wyatt, Robert Brown, Snehil Gupta, Nicole Venteris, Aditi Gupta, Weiwei Ma, Ethan Hillis, Patrick Cannon, Marty Alvarez, Justin Starren, Kristi Holmes, Matthew Carson, Albert Lai, and Adam Wilcox
Data for Cell-type-specific alternative splicing in the cerebral cortex of a Schinzel-Giedion Syndrome patient variant mouse model, Emma F. Jones, Timothy C. Howton, Tabea M. Soelter, Anthony B. Crumley, and Brittany Lasseigne
Data for habitat quality or quantity? Niche marginality across 21 plants and animals suggests differential responses between highland and lowland species to past climatic changes, Raúl Araya-Donoso, Austin Biddy, Adrián Munguía-Vega, Andrés Lira-Noriega, and Greer Dolby
Diencephalic and Neuropeptidergic Dysfunction in Zebrafish with Autism Risk Mutations, Summer Thyme
Disrupted development of sensory systems and the cerebellum in a zebrafish ebf3a mutant, Summer Thyme
Does Obesity Drive The Development Of Polycystic Ovary Syndrome? An Epidemiologic Study (Supplementary Tables), Ricardo Azziz
Epigenetics of type 2 diabetes and diabetes-related outcomes in the Strong Heart Study (additional file 2), Arce Domingo-Relloso, Matthew O. Gribble, Angela L. Riffo-Campos, Karin Haack, Shelley A. Cole, Maria Tellez-Plaza, Jason G. Umans, Amanda M. Fretts, Ying Zhang, M. Daniele Fallin, Ana Navas-Acien, and Todd M. Everson
Evaluation of altered cell-cell communication between glia and neurons in the hippocampus of 3xTg-AD mice at two time points, Tabea M. Soelter, Timothy C. Howton, Elizabeth J. Wilk, Jordan H. Whitlock, Amanda Clark, Allison Birnbaum, Dalton Patterson, Constanza Cortes, and Brittany N. Lasseigne
Evidence of molecular mimicry in multisystem inflammatory syndrome in children (MIS-C), Aaron Bodansky, Robert Mettelman, Joseph Sabatino, Sara Vazquez, Janet Chou, Tanya Novak, Kristin Moffitt, Haleigh Miller, Andrew Kung, Elze Rackaityte, Colin Zamecnik, Jayant Rajan, Hannah Kortbawi, Caleigh Mandel-Brehm, Anthea Mitchell, Chung-Yu Wang, Aditi Saxena, Kelsey Zorn, David Yu, Mikhail Pogorelyy, Walid Awad, Allison Kirk, John Pluvinage, Michael Wilson, Laura Loftis, Charlotte Hobbs, Keiko Tarquinio, Michelle Kong, Julie Fitzgerald, Paula Espinal, Tracie Walker, Stephanie Schwartz, Hillary Crandall, Katherine Irby, Mary Staat, Courtney Rowan, Jennifer Schuster, Natasha Halasa, Shira Gertz, Elizabeth Mack, Aline Maddux, Natalie Cvijanovich, Matt Zinter, Laura Zambrano, Angela Campbell, Paul Thomas, Adrienne Randolph, Mark Anderson, and Joseph DeRisi
Excitatory synaptic structural abnormalities produced by templated aggregation of α-syn in the basolateral amygdala, Laura Volpicelli-Daley
HBI: a hierarchical Bayesian interaction model to estimate cell-type-specific methylation quantitative trait loci incorporating priors from cell-sorted bisulfite sequencing data (additional file 2), Youshu Cheng, Biao Cai, Hongyu Li, Xinyu Zhang, Gypsyamber D’Souza, Sadeep Shrestha, Andrew Edmonds, Jacquelyn Meyers, Margaret Fischl, Seble Kassaye, Kathryn Anastos, Mardge Cohen, Bradley E. Aouizerat, Ke Xu, and Hongyu Zhao
HBI: a hierarchical Bayesian interaction model to estimate cell-type-specific methylation quantitative trait loci incorporating priors from cell-sorted bisulfite sequencing data (additional file 3), Youshu Cheng, Biao Cai, Hongyu Li, Xinyu Zhang, Gypsyamber D’Souza, Sadeep Shrestha, Andrew Edmonds, Jacquelyn Meyers, Margaret Fischl, Seble Kassaye, Kathryn Anastos, Mardge Cohen, Bradley E. Aouizerat, Ke Xu, and Hongyu Zhao
HBI: a hierarchical Bayesian interaction model to estimate cell-type-specific methylation quantitative trait loci incorporating priors from cell-sorted bisulfite sequencing data (additional file 4), Youshu Cheng, Biao Cai, Hongyu Li, Xinyu Zhang, Gypsyamber D’Souza, Sadeep Shrestha, Andrew Edmonds, Jacquelyn Meyers, Margaret Fischl, Seble Kassaye, Kathryn Anastos, Mardge Cohen, Bradley E. Aouizerat, Ke Xu, and Hongyu Zhao
HBI: a hierarchical Bayesian interaction model to estimate cell-type-specific methylation quantitative trait loci incorporating priors from cell-sorted bisulfite sequencing data (additional file 5), Youshu Cheng, Biao Cai, Hongyu Li, Xinyu Zhang, Gypsyamber D’Souza, Sadeep Shrestha, Andrew Edmonds, Jacquelyn Meyers, Margaret Fischl, Seble Kassaye, Kathryn Anastos, Mardge Cohen, Bradley E. Aouizerat, Ke Xu, and Hongyu Zhao
HBI: a hierarchical Bayesian interaction model to estimate cell-type-specific methylation quantitative trait loci incorporating priors from cell-sorted bisulfite sequencing data (additional file 6), Youshu Cheng, Biao Cai, Hongyu Li, Xinyu Zhang, Gypsyamber D’Souza, Sadeep Shrestha, Andrew Edmonds, Jacquelyn Meyers, Margaret Fischl, Seble Kassaye, Kathryn Anastos, Mardge Cohen, Bradley E. Aouizerat, Ke Xu, and Hongyu Zhao
HBI: a hierarchical Bayesian interaction model to estimate cell-type-specific methylation quantitative trait loci incorporating priors from cell-sorted bisulfite sequencing data (additional file 7), Youshu Cheng, Biao Cai, Hongyu Li, Xinyu Zhang, Gypsyamber D’Souza, Sadeep Shrestha, Andrew Edmonds, Jacquelyn Meyers, Margaret Fischl, Seble Kassaye, Kathryn Anastos, Mardge Cohen, Bradley E. Aouizerat, Ke Xu, and Hongyu Zhao
IL-1R1 signaling in TBI: assessing chronic impacts and neuroinflammatory dynamics in a mouse model of mild closed-head injury (additional file 2), Jonathan C. Vincent, Colleen N. Garnett, James B. Watson, Emma K. Higgins, Teresa Macheda, Lydia Sanders, Kelly N. Roberts, Ryan K. Shahidehpour, Eric M. Blalock, Ning Quan, and Adam D. Bachstetter
Integration into UAB UBRITE/PHARMALCHEMY Resource, Roman Hawrych
IκBα kinase inhibitor BAY 11-7082 promotes anti-tumor effect in RAS-driven cancers (additional file 1), Praveen Guruvaiah and Romi Gupta
IκBα kinase inhibitor BAY 11-7082 promotes anti-tumor effect in RAS-driven cancers (additional file 2), Praveen Guruvaiah and Romi Gupta
IκBα kinase inhibitor BAY 11-7082 promotes anti-tumor effect in RAS-driven cancers (additional file 3), Praveen Guruvaiah and Romi Gupta
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage (additional file 1), Emma F. Jones, Timothy C. Howton, Victoria L. Flanary, Amanda D. Clark, and Brittany N. Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage (additional file 2), Emma F. Jones, Timothy C. Howton, Victoria L. Flanary, Amanda D. Clark, and Brittany N. Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage (additional file 3), Emma F. Jones, Timothy C. Howton, Victoria L. Flanary, Amanda D. Clark, and Brittany N. Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage (additional file 4), Emma F. Jones, Timothy C. Howton, Victoria L. Flanary, Amanda D. Clark, and Brittany N. Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage (additional file 5), Emma F. Jones, Timothy C. Howton, Victoria L. Flanary, Amanda D. Clark, and Brittany N. Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage (additional file 6), Emma F. Jones, Timothy C. Howton, Victoria L. Flanary, Amanda D. Clark, and Brittany N. Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage (additional file 7), Emma F. Jones, Timothy C. Howton, Victoria L. Flanary, Amanda D. Clark, and Brittany N. Lasseigne
Mechanism of Enhancing Chemotherapy Efficacy in Pancreatic Ductal Adenocarcinoma with Paricalcitol and Hydroxychloroquine: A Single Cell RNA Sequencing - Part1, Purnachandra Nagaraju Ganji and Bassel El-Rayes
Mechanism of Enhancing Chemotherapy Efficacy in Pancreatic Ductal Adenocarcinoma with Paricalcitol and Hydroxychloroquine: A Single Cell RNA Sequencing - Part2, Purnachandra Nagaraju Ganji and Bassel El-Rayes
Mechanism of Enhancing Chemotherapy Efficacy in Pancreatic Ductal Adenocarcinoma with Paricalcitol and Hydroxychloroquine: A Single Cell RNA Sequencing - Part3, Purnachandra Nagaraju Ganji and Bassel El-Rayes
Mechanism of Enhancing Chemotherapy Efficacy in Pancreatic Ductal Adenocarcinoma with Paricalcitol and Hydroxychloroquine: A Single Cell RNA Sequencing - Part4, Purnachandra Nagaraju Ganji and Bassel El-Rayes
Microbiome-based biomarkers to guide personalized microbiome-based therapies for Parkinson's disease, Haydeh Payami, Timothy R. Sampson, Charles F. Murchison, and Zachary D. Wallen
Multimodal genome-wide survey of progressing and non-progressing breast ductal carcinoma in-situ (additional file 3), Marija Debeljak, Soonweng Cho, Bradley M. Downs, Michael Considine, Brittany Avin-McKelvey, Yongchun Wang, Phillip N. Perez, William E. Grizzle, Katherine A. Hoadley, Charles F. Lynch, Brenda Y. Hernandez, Paul J. van Diest, Wendy Cozen, Ann S. Hamilton, Debra Hawes, Edward Gabrielson, Ashley Cimino-Mathews, Liliana D. Florea, Leslie Cope, and Christopher B. Umbricht
Multimodal genome-wide survey of progressing and non-progressing breast ductal carcinoma in-situ (additional file 4), Marija Debeljak, Soonweng Cho, Bradley M. Downs, Michael Considine, Brittany Avin-McKelvey, Yongchun Wang, Phillip N. Perez, William E. Grizzle, Katherine A. Hoadley, Charles F. Lynch, Brenda Y. Hernandez, Paul J. van Diest, Wendy Cozen, Ann S. Hamilton, Debra Hawes, Edward Gabrielson, Ashley Cimino-Mathews, Liliana D. Florea, Leslie Cope, and Christopher B. Umbricht
National Spinal Cord Injury Statistics Center (NSCISC) restricted accessible data, Yuying Chen
Navigating uncertainty in environmental DNA detection of a nuisance marine macroalga, Patrick Nichols, Kaʻuaʻoa Fraiola, Alison Sherwood, Brian Hauk, Keolohilani Lopes Jr, Colt Davis, James Fumo, Chelsie Counsell, Taylor Williams, Heather Spalding, and Peter Marko
Patients with sporadic FTLD exhibit similar increases in lysosomal proteins and storage material as patients with FTD due to GRN mutations (additional file 2), Skylar E. Davis, Anna K. Cook, Justin A. Hall, Yuliya Voskobiynyk, Nancy V. Carullo, Nicholas R. Boyle, Ahmad R. Hakim, Kristian M. Anderson, Kierra P. Hobdy, Derian A. Pugh, Charles F. Murchison, Laura J. McMeekin, Micah Simmons, Katherine A. Margolies, Rita M. Cowell, Alissa L. Nana, Salvatore Spina, Lea T. Grinberg, Bruce L. Miller, William W. Seeley, and Andrew E. Arrant
Post-processed data for: Dopamine D1 receptor activation in the striatum is sufficient to drive reinforcement of anteceding cortical patterns, Nuria Vendrell Llopis, Jose Carmena, and Ehud Isacoff
Rare disease patient matchmaking: development and outcomes of an internet case-finding strategy in the Undiagnosed Diseases Network (additional file 1), Kimberly LeBlanc, Emily Glanton, Anna Nagy, Jorick Bater, Tala Berro, Molly A. McGuinness, Courtney Studwell, and Matthew Might
REasons for Geographic And Racial Differences in Stroke (REGARDS), Suzanne Judd
Seasonality and inter-annual stability in the population genetic structure of Batrachospermum gelatinosum (Rhodophyta), Sarah Shainker-Connelly, Solenn Stoeckel, Morgan Vis, Roseanna Crowell, Stacy Krueger-Hadfield, and Stacy Krueger-Hadfield
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes (additional file 2), Jennifer L. Fisher, Amanda D. Clark, Emma F. Jones, and Brittany N. Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes (additional file 3), Jennifer L. Fisher, Amanda D. Clark, Emma F. Jones, and Brittany N. Lasseigne
